CDS

Accession Number TCMCG057C05724
gbkey CDS
Protein Id XP_018472028.1
Location join(17473376..17473946,17474025..17474140,17474219..17474341,17474433..17474618,17474704..17474919,17474998..17475215,17475311..17475386,17475473..17475562,17475631..17476827)
Gene LOC108843347
GeneID 108843347
Organism Raphanus sativus

Protein

Length 930aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018616526.1
Definition PREDICTED: chaperone protein ClpC2, chloroplastic-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description Belongs to the ClpA ClpB family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03110        [VIEW IN KEGG]
KEGG_ko ko:K03696        [VIEW IN KEGG]
EC -
KEGG_Pathway ko01100        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034214        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045036        [VIEW IN EMBL-EBI]
GO:0045037        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065002        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071806        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072596        [VIEW IN EMBL-EBI]
GO:0072598        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTAGGCTCTTGACTAATTTCACAGTCCGTCCTTTACTCGGTCCCGGAAGACATGTTCAGTCCGAAGAGTATAGAAAACCAAGAAGAACATGTGTGAAGATGATGTACTCTTCACAAACTCCGGTTCTGAGTTTCCAGAGCTTCACAGGGTTAAGGGCTACCAAAGCGGTGGATCATCTAATAGCAAGGCCTGTTGCTCATGGTTTCTTTAATAAGGCTAACCTTCAAATCTCATCTCGGAAAGGAAGAGCTAGCCGAGGTGTTACAAAAGCCATGTTTGAGCGGTTCACCGAGAAGGCAATTAAGGTCATAATGCTGTCTCAAGAGGAAGCTCGGAGACTTGGACATAACTTTGTTGGCACCGAGCAGATACTGTTGGGTCTTATTGGGGAAGGGACTGGGATCGCTGCAAAGGTTCTTAAATCCACGGGGATCAATCTTAAGGATTCTCGTGTGGAAGTGGAGAAGATCATTGGAAGAGGCAGTGGGTTTGTGGCTGTGGAGATCCCTTTTACTCCTCGTGCAAAGCGTGTCCTGGAGTTGTCACTAGAGGAAGCTCGACAACTCGGGCATAACTACATTGGGTCAGAGCATCTCTTGCTTGGTCTTCTTCGTGAAGGGGAAGGTGTTGCAGCTCGTGTCCTTGAGAATTTGGGTGTAGATGCTAGTAACATCCGGACGCTGGTTATACGTATGGTCGGAGAAAACAATGAAGTGACCGCAAACGTCGGTGGAGGATCAAGCGGAAACAGCAAGATGCCAACACTGGAAGAGTATGGGACTAACTTAACCAAACTAGCAGAGGAGGGCAAACTAGATCCTGTTGTTGGAAGGCAGCCACAGATTGAACGAGTGGTCCAGATCTTGGCTCGAAGAACCAAGAACAACCCTTGTCTTATTGGGGAACCTGGAGTTGGTAAGACAGCAATAGCTGAAGGACTCGCTCAGCGAATAGCCAGTGGTGATGTTCCTGAAACAATTGAGGGGAAGACAGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACCAAGTATCGTGGAGAATTCGAGGAAAGATTGAAGAAGCTTATGGAGGAGATCAGACAGAGTGATGACATCATTCTGTTTATTGATGAAGTGCACACTCTGATCGGTGCAGGAGCAGCCGAAGGTGCCATTGATGCTGCCAACATCTTAAAGCCAGCTCTTGCCAGAGGTGAATTGCAGTGTATTGGTGCAACAACATTGGACGAGTACAGAAAGCACATTGAGAAAGATCCTGCGTTAGAGAGAAGGTTCCAGCCTGTGAAGGTACCTGAACCAACTGTTGATGAAGCTATACAGATCTTGCACGGTCTCCGTGAGCGGTATGAGATCCACCACAAGCTCCGATACACTGACGATGCCTTGGTTGCTGCTGCGCAACTCTCACATCAGTACATCAGTGATCGGTTTCTACCAGACAAAGCCATTGACTTGATTGATGAAGCTGGGTCTCGGGTTCGACTGCGCCATGCTCAGGTCCCTGAGGAAGCTAGAGAGCTTGAAAAGCAACTAAGACAGATCACTAAGGAGAAGAATGAAGCTGTGAGAGCCCAAGACTTTGAGAAGGCTGGTTCTCACCGTGACCGGGAAATAGAGCTAAGAGCCGAGATGGCAGCTGTTTTAGCCAAAGGCAAAGAAGTGAGCAAAGCTGAGACAGAAGCTGGGGAAGAAGGAGGACCTACTGTCACTGAATCCGACATCCAACACATTGTCTCCACGTGGACAGGAATCCCTGTAGAGAAAGTATCCTCCGATGAATCTAGCCGTCTTCTCAAGATGGAGCAGACGCTACACACAAGAGTCATTGGCCAAGACGAAGCCGTCAAAGCCATTAGCCGGGCCATCAGACGTGCACGTGTTGGACTCAAGAACCCGAACCGTCCCATAGCGAGTTTCATCTTCTCTGGTCCAACCGGTGTGGGGAAATCAGAGCTTGCCAAAGCTTTAGCTGCTTACTACTTCGGTTCAGAAGAAGCGATGATCCGTCTCGACATGAGTGAGTTCATGGAACGGCACACGGTCTCAAAACTCATCGGTTCGCCTCCTGGTTACGTAGGGTACACGGAAGGAGGTCAGTTAACTGAGGCGGTTCGACGCAGGCCTTACACGCTTGTCCTCTTCGACGAAATAGAGAAAGCTCATCCGGATGTGTTCAACATGATGCTTCAGATCCTAGAAGACGGGAGACTAACAGACAGCAAAGGAAGAACAGTCGATTTCAAGAACACGCTTCTGATCATGACATCGAACGTAGGAAGCAGCGTGATTGAAAAGGGTGGCAGAAGAATCGGGTTTGATCTCGACTACGACGAGAAAGACAGCAGCTACAACAGGATCAAGAGCTTGGTCACCGAGGAACTGAAGCAGTATTTCAGACCGGAGTTCTTGAACAGGTTAGATGAGATGATTGTTTTCAGACAGCTGACGAAGCTGGAAGTGAAGGAGATTGCTGATATAATGCTTAAAGAAGTGGTGGTGAGGCTTAAGGAGAAAGAGATTGAGCTTCAAGTGACGGAGAGGTTTAAGGAGAGAGTGGTGGATGAAGGGTTTGACCCGAGTTATGGTGCGAGGCCGCTGAGAAGAGCGATAATGAGGCTTCTGGAAGATAGCATGGCGGAGAAGATGCTTTCAAGGGAGATTAAAGATGGTGATTCGGTGATTGTTGATGTTGATGCTGAAGGAAGTGTGGTTGTGTTGAATGGTAAGAGTGGAGGTGGTAGTATTGCTGAAGAAGCCATGGAAGATCCAGTTTTTGTGTTGTAG
Protein:  
MARLLTNFTVRPLLGPGRHVQSEEYRKPRRTCVKMMYSSQTPVLSFQSFTGLRATKAVDHLIARPVAHGFFNKANLQISSRKGRASRGVTKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSTGINLKDSRVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGVDASNIRTLVIRMVGENNEVTANVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDEAIQILHGLRERYEIHHKLRYTDDALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKQLRQITKEKNEAVRAQDFEKAGSHRDREIELRAEMAAVLAKGKEVSKAETEAGEEGGPTVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVVVRLKEKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSREIKDGDSVIVDVDAEGSVVVLNGKSGGGSIAEEAMEDPVFVL